Development of In Silico Brain for DARPA REPAIR project. DARPA Neural Engineering, Science, and Technology Meeting.(2010).
Interlaminar Granger causality and alpha oscillations in a model of macaque cortex. Computational Neuroscience.(2011).
Multiscale modeling of cortical information flow in Parkinson's disease. Computational Neuroscience Meeting (CNS '13).(2013).
Interlaminar feedback connections dominate in macaque inferotemporal cortex: in vivo and in silico studies. Society for Neuroscience.(2011).
Information flow in optogenetically stimulated macaque motor cortex: simulation and experiment. Neural Control of Movement (NCM) meeting.(2014).
Computational capacity as a function of network size. Society for Neuroscience 2016 (SFN '16).(2016).
Electrostimulation as a prosthesis for repair of information flow in a computer model of neocortex. IEEE Trans Neural Syst Rehab Eng. 20, 153–60.(2012).
Effects of basal ganglia on cortical computation: A hybrid network/neural field model. Society for Neuroscience 2012 (SFN '12).(2012).
Modulation of stimulus fields in a computer model of the thalamocortical system. Society for Neuroscience.(2011).
Optimization by Adaptive Stochastic Descent. PLOS ONE. 13, 1-16.(2018).
Receptive field formation and erasure in somatosensory cortex. Society for Neuroscience 2013 (SFN '13).(2013).
One size does not fit all: Calibrating microstimulation to individual subjects using spiking network models. Society for Neuroscience 2014 (SFN '14).(2014).
Effects of basal ganglia on cortical computation: a hybrid network/neural field model. Society for Neuroscience.(2012).
Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex. BMC Neuroscience. 15, P107.(2014).
Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex. Computational Neuroscience Meeting (CNS 14').(2014).
Cortical information flow in Parkinson's disease: a composite network/field model. Front Comput Neurosci. 7, 39.(2013).
Modeling pathogenesis and treatment response in childhood absence epilepsy. Epilepsia. 59, 135–145.(2018).
Grid-cell models for navigation and context discrimination. Society for Neuroscience 2009 (SFN '09).(2009).
Thalamocortical dynamics of rhythmic selective and tonic suppressive modes in the auditory system. Society for Neuroscience Abstracts. 44,(2014).
Global dynamics of selective attention and its lapses in primary auditory cortex. Nat Neurosci. In press.(2016).
Thalamocortical dynamics of rhythmic selective and tonic suppressive modes in the auditory system. Society for Neuroscience 2014 (SFN '14).(2014).
Computer model of a theta-gamma dissociation in hippocampus. Society for Neuroscience 2009 (SFN '09).(2009).
Towards real-time communication between in vivo neurophysiological data sources and simulator-based brain biomimetic models. Journal of Computational Surgery. 3, 12.(2014).
Repairing Lesions via Kernel Adaptive Inverse Control in a Biomimetic Model of Sensorimotor Cortex. Neural Engineering (NER), 2015 7th International IEEE/EMBS Conference. 1-4.(2015).
Multithreaded Stochastic PDES for Reactions and Diffusions in Neurons. ACM Transactions on Modeling and Computer Simulation (TOMACS). 27, 7.(2017).
Load balancing for multi-threaded PDES of stochastic reaction-diffusion in neurons. J Simulation. 11, 267.(2017).
Ntw-mt: A multi-threaded simulator for reaction diffusion simulations in neuron. Proceedings of the 3rd ACM SIGSIM Conference on Principles of Advanced Discrete Simulation. 157–167.(2015).
Site-directed mRNA editing of sodium channels has potential to alter neuronal firing and network dynamics: Computer models. Society for Neuroscience 2017 (SFN '17).(2017).
Modeling thalamocortical oscillations. (Ulinski, P., Jones EG., & Peters A., Ed.).Cerebral Cortex. 13, 479-509.(1999).
Reinforcement learning of 2-joint virtual arm reaching in detailed cortex simulation. Neural Control of Movement.(2012).
Computer models of stroke recovery: Implications for neurorehabilitation. The Neuroscientist. 5, 100-111.(1999).
Circuit changes augment disinhibited shock responses in computer models of neocortex. American Epilepsy Society Annual Meeting. 3, 284.(2008).
Independent variable timestep integration of individual neurons for network simulations. 17, 903-921.(2005).
Rule-based firing for network simulations. Neurocomputing. 69, 1160-1164.(2006).
Broadening of activity with flow across neural structures. Perception. 37, 401-407.(2008).
Realistic single-neuron modeling. Seminars in Neuroscience. 4, 15-25.(1992).
Brain organization: from molecules to parallel processing. (Trimble, MR., & Cummings JL., Ed.).Contemporary Behavioral Neurology. 5-28.(1997).
Neocortical simulation for epilepsy surgery guidance: localization and intervention. (Bass, B., & Garbey M., Ed.).Computational Surgery and Dual Training. 339–349.(2014).
Computational Neuroscience. (Asbury, AK., McKhann GM., & McDonald WI., Ed.).Diseases of the Nervous System: Clinical Neurobiology.(1992).
A computer model of clonazepam's effect in a thalamic slice model of absence epilepsy. Neuroreport. 8, 3339-3343.(1997).
Neural query system: data-mining from within the NEURON simulator. Neuroinformatics. 4, 163-176.(2006).
Computers, causality and cure in epilepsy. Brain. 140, 516-519.(2017).
Can the hippocampus tell time?: The temporo-septal engram shift model. Neuroreport. 10, 2301-2306.(1999).
Control of slow oscillations in the thalamocortical neuron: A computer model. Neuroscience. 70, 673-684.(1996).
Adapting a feedforward heteroassociative network to Hodgkin-Huxley dynamics. J. Computational Neuroscience. 5, 353-364.(1998).
Just-in-time connectivity for very large neuronal networks. Computational Neuroscience Meeting (CNS 07').(2007).
Simulation neurotechnologies for advancing brain research: parallelizing large networks in NEURON. Neural Comput. 28, 2063-2090.(2016).
Beyond the canon: temporal and spatial multiscale organization in cortex. Computational Neuroscience Meeting Workshop.(2015).
Data mining through simulation. Methods Mol Biol. 401, 155-166.(2007).
Dynamic interactions determine partial thalamic quiescence in a computer network model of spike-and-wave seizures. jnphys. 77, 1679-1696.(1997).
Computer simulation of epilepsy: implications for seizure spread and behavioral dysfunction. Epilepsy & Behavior. 7, 336-344.(2005).
Computer modeling of epilepsy: opportunities for drug discovery. Drug Discov Today: Dis Model. In press.(2017).
The virtual slice setup. J Neurosci Methods. 171, 309-315.(2008).
Circuit changes augment disinhibited shock responses in computer models of neocortex. American Epilepsy Society Annual Meeting.(2008).
Multiscale modeling for clinical translation in neuropsychiatric disease. J Comput Surgery. 1, 7.(2014).
Optimizing synaptic conductance calculation for network simulations. ncomp. 8, 501-510.(1996).
Computer Models of Hippocampal Circuit Changes of the Kindling Model of Epilepsy. Artificial Intelligence in Medicine. 13, 81-98.(1998).
Tonic-clonic transitions in computer simulation. J Clin Neurophys. 24, 175-181.(2007).
Computer network model predicts dependence of neocortical laminar activation patterns on form of stimulation. Society for Neuroscience 2010 (SFN '10).(2010).
Computer modelling of epilepsy. Nat Rev Neurosci. 9, 626-637.(2008).
Unmasking unmasked: Neural dynamics following stroke. Progress in Brain Research. 121, 203-218.(1999).
Simulation of large networks: technique and progress. (Soltesz, I., & Staley K., Ed.).Computational Neuroscience in Epilepsy. 3-17.(2008).
Direct dyslexia: Preserved oral reading of real words in Wernicke's aphasia. Brain. 112, 583-594.(1989).
Hybrid neural networks - combining abstract and realistic neural units. IEEE Engineering in Medicine and Biology Society Proceedings. 6, 3996-3998.(2004).
Multiscale modeling in the clinic: diseases of the brain and nervous system. Brain Inform. 4, 219-230.(2017).
Multiscale modeling of brain disease. Society for Neuroscience 2018 (SFN '18).(2018).
Computer network model of mossy fiber sprouting in dentate gyrus. Epilepsia – AES Proceedings. 37 S. 5, 117.(1996).
A rule-based firing model for neural networks. Int. J. for Bioelectromagnetism. 7, 47-50.(2005).