Lab Publications

Found 65 results
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2015
Dura-Bernal, S., Zhou X., Neymotin S., Przekwas A., Francis J. T., & Lytton WW. (2015).  Cortical spiking network interfaced with virtual musculoskeletal arm and robotic arm. Frontiers in Neurorobotics. 9,
Dura-Bernal, S., Majumdar A., Neymotin S., Sivagnanam S., Francis J. T., & Lytton WW. (2015).  A dynamic data-driven approach to closed-loop neuroprosthetics based on multiscale biomimetic brain models. IEEE Interanationl Conference on High Performance Computing 2015 Workshop: InfoSymbiotics/Dynamic Data Driven Applications Systems (DDDAS) for Smarter Systems, Bangalore, India.
Dura-Bernal, S., Kerr C., Neymotin S., Suter B., Shepherd G., Francis J., et al. (2015).  Large-scale M1 microcircuit model with plastic input connections from biological PMd neurons used for prosthetic arm control. 24th Annual Computational Neuroscience Meeting (CNS15).
Neymotin, S., McDougal R. A., Sherif MA., Fall CP., Hines ML., & Lytton WW. (2015).  Neuronal calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model. Neural Comput. 27, 898–924.
Seidenstein, A., Neymotin S. A., Fesharaki A., Hines M. L., Mcdougal R. A., Bulanova A. S., et al. (2015).  Neuronal network bump attractors augmented by calcium up-regulation of Ih in a multiscale computer model of prefrontal cortex. Society for Neuroscience 2015 (SFN '15).
Li, K., Dura-Bernal S., Francis J., Lytton WW., & Principe J. (2015).  Repairing Lesions via Kernel Adaptive Inverse Control in a Biomimetic Model of Sensorimotor Cortex. Neural Engineering (NER), 2015 7th International IEEE/EMBS Conference. 1-4.
Choi, J. S., Menzies R. J., Dura-Bernal S., Francis J. T., Lytton WW., & Kerr C. C. (2015).  Spiking network modeling of neuronal dynamics in individual rats. BMC Neuroscience.
2014
Dura-Bernal, S., Prins N., Neymotin S., Prasad A., Sanchez J., Francis JT., et al. (2014).  Evaluating Hebbian reinforcement learning BMI using an in silico brain model and a virtual musculoskeletal arm.. Neural Control of Movement.
Dura-Bernal, S., Li K., Brockmeier A., Kerr C., Neymotin S., Principe J., et al. (2014).  Modulation of virtual arm trajectories via microstimulation in a spiking model of sensorimotor cortex. BMC Neuroscience. 15, P106.
Dura-Bernal, S., Li K., Brockmeier A., Kerr C., Neymotin S., Principe J., et al. (2014).  Modulation of virtual arm trajectories via microstimulation in a spiking model of sensorimotor cortex. Computational Neuroscience Meeting (CNS '14). 15, P106.
Chadderdon, GL., Mohan A., Suter BA., Neymotin S., Kerr CC., Francis JT., et al. (2014).  Motor cortex microcircuit simulation based on brain activity mapping. Neural Comput. 26, 1239–1262.
Kerr, CC., O'Shea DJ., Goo W., Dura-Bernal S., Francis JT., Diester I., et al. (2014).  Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex. BMC Neuroscience. 15, P107.
Kerr, C. C., O'Shea D. J., Goo W., Dura-Bernal S., Francis J. T., Diester I., et al. (2014).  Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex. Computational Neuroscience Meeting (CNS 14').
Kerr, C., Choi J. S., Dura-Bernal S., Francis J. T., & Lytton WW. (2014).  One size does not fit all: Calibrating microstimulation to individual subjects using spiking network models. Society for Neuroscience 2014 (SFN '14).
Dura-Bernal, S., Li K., Brockmeier A., Kerr CC., Neymotin S., Principe J., et al. (2014).  Repairing lesions via microstimulation in a spiking network model driving a virtual arm.. Society for Neuroscience.
Dura-Bernal, S., Chadderdon GL., Neymotin S., Francis JT., & Lytton WW. (2014).  Towards a real-time interface between a biomimetic model of sensorimotor cortex and a robotic arm. Pattern Recognit Lett. 36, 204–212.
Lee, GJ., Matsunaga A., Dura-Bernal S., Zhang W., Lytton WW., Francis JT., et al. (2014).  Towards real-time communication between in vivo neurophysiological data sources and simulator-based brain biomimetic models. Journal of Computational Surgery. 3, 12.
Lee, GJ., Matsunaga A., Dura-Bernal S., Zhang W., Lytton WW., Francis JT., et al. (2014).  Towards real-time communication between in vivo neurophysiological data sources and simulator-based brain biomimetic models. Journal of Computational Surgery. 3, 12.
2012
Chadderdon, GL., Neymotin SA., Kerr CC., Francis JT., & Lytton WW. (2012).  Dopamine-based reinforcement learning of virtual arm reaching task in a spiking model of motor cortex. International Conference on Cognititve and Neural Systems 16.
Chadderdon, GL., Neymotin SA., Kerr CC., Francis JT., & Lytton WW. (2012).  Dopamine-based reinforcement learning of virtual arm reaching task in a spiking model of motor cortex. Society for Neuroscience.
Sanchez, J., Lytton WW., Carmena J., Principe J., Fortes J., Barbour R., et al. (2012).  Dynamically repairing and replacing neural networks: using hybrid computational and biological tools. {IEEE} Pulse. 3, 57-59.
Sanchez, J., Lytton WW., Carmena J., Principe J., Fortes J., Barbour R., et al. (2012).  Dynamically repairing and replacing neural networks: using hybrid computational and biological tools. {IEEE} Pulse. 3, 57-59.
Kerr, CC., Neymotin S., Chadderdon GL., Fietkiewicz CT., Francis JT., & Lytton WW. (2012).  Electrostimulation as a prosthesis for repair of information flow in a computer model of neocortex. IEEE Trans Neural Syst Rehab Eng. 20, 153–60.
Kerr, CC., Neymotin S., Chadderdon GL., Fietkiewicz CT., Francis JT., & Lytton WW. (2012).  Electrostimulation as a prosthesis for repair of information flow in a computer model of neocortex. IEEE Trans Neural Syst Rehab Eng. 20, 153–60.
Neymotin, S. A., Chadderdon G. L., Kerr C. C., Francis J. T., & Lytton WW. (2012).  Reinforcement learning of 2-joint virtual arm reaching in computer model of sensory and motor cortex. Society for Neuroscience 2012 (SFN '12).
Lytton, WW., Kerr CC., Chadderdon GL., Neymotin SA., & Francis JT. (2012).  Reinforcement learning of 2-joint virtual arm reaching in detailed cortex simulation. Neural Control of Movement.
Neymotin, S. A., Chadderdon G. L., Kerr C. C., Francis J. T., & Lytton W. W. (2012).  Reinforcement learning of 2-joint virtual arm reaching in motor cortex simulation. Computational Neuroscience Meeting (CNS '12).
2011
Neymotin, S. A., Kerr C., Francis J. T., & Lytton WW. (2011).  Attentional modulation of receptive fields in a computer model of the thalamocortical system. Society for Neuroscience 2011 (SFN '11).
Neymotin, S., Lee HY., Park EH., Fenton AA., & Lytton WW. (2011).  Emergence of physiological oscillation frequencies in a computer model of neocortex. Front Comput Neurosci. 5, 19.
Neymotin, S., Lazarewicz MT., Sherif M., Contreras D., Finkel LH., & Lytton WW. (2011).  Ketamine disrupts theta modulation of gamma in a computer model of hippocampus. J Neurosci. 31, 11733-11743.
Kerr, CC., Neymotin SA., Song W., Francis JT., & Lytton WW. (2011).  Modulation of stimulus fields in a computer model of the thalamocortical system. Society for Neuroscience.
Neymotin, SA., Kerr CC., Chadderdon GL., Francis JT., & Lytton WW. (2011).  Restoring physiological oscillations using neuroprosthetic spike-timing-dependent plasticity in computer model of neocortex. Society for Neuroscience.
Neymotin, SA., Kerr CC., Fietkiewicz CT., Chadderdon GL., & Lytton WW. (2011).  Spike-timing-dependent plasticity and subcortical waves enhance alpha oscillations in a computer model of neocortex. Neuroinformatics.
Neymotin, S., Jacobs KM., Fenton AA., & Lytton WW. (2011).  Synaptic information transfer in computer models of neocortical columns. J Comput Neurosci. 30, 69-84.
Neymotin, S., Kerr CC., Francis JT., & Lytton WW. (2011).  Training oscillatory dynamics with spike-timing-dependent plasticity in a computer model of neocortex. 2011 IEEE Signal Processing in Medicine and Biology Symposium (SPMB). 1–6.