Lab Publications

Found 65 results
Author Title [ Type(Asc)] Year
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Journal Article
Fenton, AA., Kao HY., Neymotin S., Olypher A., Vayntrub Y., Lytton WW., et al. (2008).  Unmasking the CA1 ensemble place code by exposures to small and large environments: more place cells and multiple, irregularly arranged, and expanded place fields in the larger space. jnsci. 28, 11250-11262.
Neymotin, S., Talbot ZN., Jung JQ., Fenton AA., & Lytton WW. (2017).  Tracking recurrence of correlation structure in neuronal recordings. J Neurosci Methods. 275, 1-9.
Lee, GJ., Matsunaga A., Dura-Bernal S., Zhang W., Lytton WW., Francis JT., et al. (2014).  Towards real-time communication between in vivo neurophysiological data sources and simulator-based brain biomimetic models. Journal of Computational Surgery. 3, 12.
Lee, GJ., Matsunaga A., Dura-Bernal S., Zhang W., Lytton WW., Francis JT., et al. (2014).  Towards real-time communication between in vivo neurophysiological data sources and simulator-based brain biomimetic models. Journal of Computational Surgery. 3, 12.
Dura-Bernal, S., Chadderdon GL., Neymotin S., Francis JT., & Lytton WW. (2014).  Towards a real-time interface between a biomimetic model of sensorimotor cortex and a robotic arm. Pattern Recognit Lett. 36, 204–212.
Neymotin, S., Jacobs KM., Fenton AA., & Lytton WW. (2011).  Synaptic information transfer in computer models of neocortical columns. J Comput Neurosci. 30, 69-84.
Neymotin, S., Olypher AV., Kao HY., Kelemen E., Jozwicka AE., Lytton WW., et al. (2008).  Standardized assessment of extracellular single unit isolation quality. socns. 690, 12.
Dura-Bernal, S., Li K., Neymotin S., Francis JT., Principe JC., & Lytton WW. (2016).  Restoring behavior via inverse neurocontroller in a lesioned cortical spiking model driving a virtual arm. Front Neurosci. 10, 28.
Neymotin, S., Chadderdon GL., Kerr CC., Francis JT., & Lytton WW. (2013).  Reinforcement learning of 2-joint virtual arm reaching in computer model of sensorimotor cortex. Neural Comput. 25, 3263–3293.
Forgacs, PB., Gizycki H., Selesnick I., Syed NA., Ebrahim K., Avitable M., et al. (2008).  Perisaccadic parietal and occipital gamma power in light and in complete darkness. Perception. 37, 419-432.
Neymotin, S., McDougal R. A., Sherif MA., Fall CP., Hines ML., & Lytton WW. (2015).  Neuronal calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model. Neural Comput. 27, 898–924.
Kerr, CC., O'Shea DJ., Goo W., Dura-Bernal S., Francis JT., Diester I., et al. (2014).  Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex. BMC Neuroscience. 15, P107.
Chadderdon, GL., Mohan A., Suter BA., Neymotin S., Kerr CC., Francis JT., et al. (2014).  Motor cortex microcircuit simulation based on brain activity mapping. Neural Comput. 26, 1239–1262.
Dura-Bernal, S., Li K., Brockmeier A., Kerr C., Neymotin S., Principe J., et al. (2014).  Modulation of virtual arm trajectories via microstimulation in a spiking model of sensorimotor cortex. BMC Neuroscience. 15, P106.
Neymotin, S., Lazarewicz MT., Sherif M., Contreras D., Finkel LH., & Lytton WW. (2011).  Ketamine disrupts theta modulation of gamma in a computer model of hippocampus. J Neurosci. 31, 11733-11743.
Neymotin, S., Lee HY., Fenton AA., & Lytton WW. (2010).  Interictal EEG Discoordination in a Rat Seizure Model. J Clin Neurophysiol. 27, 438–444.
Dura-Bernal, S., Neymotin S., Kerr CC., Sivagnanam S., Majumdar A., Francis JT., et al. (2017).  Evolutionary algorithm optimization of biological learning parameters in a biomimetic neuroprosthesis. IBM Journal of Research and Development. 61, 6–1.
Neymotin, S., Lee HY., Park EH., Fenton AA., & Lytton WW. (2011).  Emergence of physiological oscillation frequencies in a computer model of neocortex. Front Comput Neurosci. 5, 19.
Kerr, CC., Neymotin S., Chadderdon GL., Fietkiewicz CT., Francis JT., & Lytton WW. (2012).  Electrostimulation as a prosthesis for repair of information flow in a computer model of neocortex. IEEE Trans Neural Syst Rehab Eng. 20, 153–60.
Kerr, CC., Neymotin S., Chadderdon GL., Fietkiewicz CT., Francis JT., & Lytton WW. (2012).  Electrostimulation as a prosthesis for repair of information flow in a computer model of neocortex. IEEE Trans Neural Syst Rehab Eng. 20, 153–60.
Sanchez, J., Lytton WW., Carmena J., Principe J., Fortes J., Barbour R., et al. (2012).  Dynamically repairing and replacing neural networks: using hybrid computational and biological tools. {IEEE} Pulse. 3, 57-59.
Sanchez, J., Lytton WW., Carmena J., Principe J., Fortes J., Barbour R., et al. (2012).  Dynamically repairing and replacing neural networks: using hybrid computational and biological tools. {IEEE} Pulse. 3, 57-59.
Dura-Bernal, S., Zhou X., Neymotin S., Przekwas A., Francis J. T., & Lytton WW. (2015).  Cortical spiking network interfaced with virtual musculoskeletal arm and robotic arm. Frontiers in Neurorobotics. 9,
Song, W., Kerr CC., Lytton WW., & Francis JT. (2013).  Cortical plasticity induced by spike-triggered microstimulation in primate somatosensory cortex. PLoS One. 8, e57453.
Lytton, WW., Neymotin S., Lee HY., Uhlrich DJ., & Fenton AA. (2008).  Circuit changes augment disinhibited shock responses in computer models of neocortex. American Epilepsy Society Annual Meeting. 3, 284.
Fenton, AA., Lytton WW., Barry JM., Lenck-Santini PP., Zinyuk LE., Kubík S., et al. (2010).  Attention-like modulation of hippocampus place cell discharge. J Neurosci. 30, 4613-4625.
Conference Proceedings
Denham, S., Poirazi P., De Schutter E., Friston K., Chan H. Ka, Nowotny T., et al. (2017).  26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1. BMC Neuroscience. 18, 58.
Denham, S., Poirazi P., De Schutter E., Friston K., Chan H. Ka, Nowotny T., et al. (2017).  26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1. BMC Neuroscience. 18, 58.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Conference Paper
Dura-Bernal, S., Chadderdon G.L.., Neymotin S., Zhou X., Przekwas A.., Francis J.T.., et al. (2013).  Virtual musculoskeletal arm and robotic arm driven by a biomimetic model of sensorimotor cortex with reinforcement learning. Signal Processing in Medicine and Biology Symposium (SPMB), 2013 IEEE. 1-5.
Neymotin, S., Kerr CC., Francis JT., & Lytton WW. (2011).  Training oscillatory dynamics with spike-timing-dependent plasticity in a computer model of neocortex. 2011 IEEE Signal Processing in Medicine and Biology Symposium (SPMB). 1–6.
Choi, J. S., Menzies R. J., Dura-Bernal S., Francis J. T., Lytton WW., & Kerr C. C. (2015).  Spiking network modeling of neuronal dynamics in individual rats. BMC Neuroscience.
Neymotin, SA., Kerr CC., Fietkiewicz CT., Chadderdon GL., & Lytton WW. (2011).  Spike-timing-dependent plasticity and subcortical waves enhance alpha oscillations in a computer model of neocortex. Neuroinformatics.
Neymotin, SA., Kerr CC., Chadderdon GL., Francis JT., & Lytton WW. (2011).  Restoring physiological oscillations using neuroprosthetic spike-timing-dependent plasticity in computer model of neocortex. Society for Neuroscience.
Dura-Bernal, S., Li K., Brockmeier A., Kerr CC., Neymotin S., Principe J., et al. (2014).  Repairing lesions via microstimulation in a spiking network model driving a virtual arm.. Society for Neuroscience.
Li, K., Dura-Bernal S., Francis J., Lytton WW., & Principe J. (2015).  Repairing Lesions via Kernel Adaptive Inverse Control in a Biomimetic Model of Sensorimotor Cortex. Neural Engineering (NER), 2015 7th International IEEE/EMBS Conference. 1-4.
Neymotin, S. A., Chadderdon G. L., Kerr C. C., Francis J. T., & Lytton W. W. (2012).  Reinforcement learning of 2-joint virtual arm reaching in motor cortex simulation. Computational Neuroscience Meeting (CNS '12).
Lytton, WW., Kerr CC., Chadderdon GL., Neymotin SA., & Francis JT. (2012).  Reinforcement learning of 2-joint virtual arm reaching in detailed cortex simulation. Neural Control of Movement.
Neymotin, S. A., Chadderdon G. L., Kerr C. C., Francis J. T., & Lytton WW. (2012).  Reinforcement learning of 2-joint virtual arm reaching in computer model of sensory and motor cortex. Society for Neuroscience 2012 (SFN '12).
Neymotin, S. A., Fenton A. A., & Lytton WW. (2010).  Recurrence of correlation structure in hippocampal neuronal ensembles during spatial behavior. Society for Neuroscience 2010 (SFN '10).
Kerr, C., Von Kraus L., Iordanou J., Neymotin S. A., Francis J., & Lytton WW. (2013).  Receptive field formation and erasure in somatosensory cortex. Society for Neuroscience 2013 (SFN '13).
Kerr, C., Choi J. S., Dura-Bernal S., Francis J. T., & Lytton WW. (2014).  One size does not fit all: Calibrating microstimulation to individual subjects using spiking network models. Society for Neuroscience 2014 (SFN '14).
Seidenstein, A., Neymotin S. A., Fesharaki A., Hines M. L., Mcdougal R. A., Bulanova A. S., et al. (2015).  Neuronal network bump attractors augmented by calcium up-regulation of Ih in a multiscale computer model of prefrontal cortex. Society for Neuroscience 2015 (SFN '15).
Park, E.., Neymotin S.., Lytton W.., & Fenton A.. A. (2009).  Neural discoordination of hippocampus and prefrontal cortex spike trains in a phencyclidine schizophrenia-related animal model. Society for Neuroscience 2009 (SFN '09).
Kerr, C. C., O'Shea D. J., Goo W., Dura-Bernal S., Francis J. T., Diester I., et al. (2014).  Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex. Computational Neuroscience Meeting (CNS 14').
Dura-Bernal, S., Li K., Brockmeier A., Kerr C., Neymotin S., Principe J., et al. (2014).  Modulation of virtual arm trajectories via microstimulation in a spiking model of sensorimotor cortex. Computational Neuroscience Meeting (CNS '14). 15, P106.
Kerr, CC., Neymotin SA., Song W., Francis JT., & Lytton WW. (2011).  Modulation of stimulus fields in a computer model of the thalamocortical system. Society for Neuroscience.
Dura-Bernal, S., Kerr C., Neymotin S., Suter B., Shepherd G., Francis J., et al. (2015).  Large-scale M1 microcircuit model with plastic input connections from biological PMd neurons used for prosthetic arm control. 24th Annual Computational Neuroscience Meeting (CNS15).
Olypher, A. V., Fenton A. A., Lytton W. W., & Prinz A. A. (2009).  Information processing in homeostatically regulated hippocampal neurons. Society for Neuroscience 2009 (SFN '09).
Kubie, J. L., Fenton A. A., Lytton WW., & Burgess N. (2009).  Grid-cell models for navigation and context discrimination. Society for Neuroscience 2009 (SFN '09).
Dura-Bernal, S., Prins N., Neymotin S., Prasad A., Sanchez J., Francis JT., et al. (2014).  Evaluating Hebbian reinforcement learning BMI using an in silico brain model and a virtual musculoskeletal arm.. Neural Control of Movement.
Dura-Bernal, S., Majumdar A., Neymotin S., Sivagnanam S., Francis J. T., & Lytton WW. (2015).  A dynamic data-driven approach to closed-loop neuroprosthetics based on multiscale biomimetic brain models. IEEE Interanationl Conference on High Performance Computing 2015 Workshop: InfoSymbiotics/Dynamic Data Driven Applications Systems (DDDAS) for Smarter Systems, Bangalore, India.
Chadderdon, GL., Neymotin SA., Kerr CC., Francis JT., & Lytton WW. (2012).  Dopamine-based reinforcement learning of virtual arm reaching task in a spiking model of motor cortex. International Conference on Cognititve and Neural Systems 16.
Chadderdon, GL., Neymotin SA., Kerr CC., Francis JT., & Lytton WW. (2012).  Dopamine-based reinforcement learning of virtual arm reaching task in a spiking model of motor cortex. Society for Neuroscience.
Fenton, A. A., Lee H., & Lytton WW. (2009).  Disinhibition can account for the neural discoordination associated with impaired cognitive control. Society for Neuroscience 2009 (SFN '09).
Kerr, CC., Fietkiewicz CT., Chadderdon GL., Neymotin SA., & Lytton WW. (2010).  Development of In Silico Brain for DARPA REPAIR project. DARPA Neural Engineering, Science, and Technology Meeting.
Francis, J. T., Chapin J., Lytton WW., Barbour R., Carmena J., Principe J., et al. (2010).  Creating the synthetic brain through hybrid computational and biological systems repairing and replacing neural networks. Society for Neuroscience 2010 (SFN '10).
Francis, J. T., Chapin J., Lytton WW., Barbour R., Carmena J., Principe J., et al. (2010).  Creating the synthetic brain through hybrid computational and biological systems repairing and replacing neural networks. Society for Neuroscience 2010 (SFN '10).
Lazarewicz, M. T., Contreras D., Finkel L. H., & Lytton WW. (2009).  Computer model of a theta-gamma dissociation in hippocampus. Society for Neuroscience 2009 (SFN '09).
Neymotin, S. A., Kerr C., Francis J. T., & Lytton WW. (2011).  Attentional modulation of receptive fields in a computer model of the thalamocortical system. Society for Neuroscience 2011 (SFN '11).
Neymotin, S. A., Lee H., Park E., Fenton A. A., & Lytton W. W. (2010).  Altered information transfer in neuronal networks marks pathology. Computational Neuroscience Meeting (CNS 10').