Credibility, Replicability, and Reproducibility in Simulation for Biomedicine and Clinical Applications in Neuroscience. Front. Neuroinform.. 12,(2018).
Embedded ensemble encoding hypothesis: The role of the ``Prepared'' cell. J. Neurosci. Res..(2018).
Genome-wide associations of schizophrenia studied with computer simulation. (Cutsuridis, V., Graham BP., Cobb S., & Vida I., Ed.).Hippocampal Microcircuits: A Computational Modeler's Resource Book. 2,(2018).
Geppetto: a reusable modular open platform for exploring neuroscience data and models. Phil. Trans. R. Soc. B. 373, 20170380.(2018).
Long-range inputs and H-current regulate different modes of operation in a multiscale model of mouse M1 microcircuits. bioRxiv.(2018).
Modeling pathogenesis and treatment response in childhood absence epilepsy. Epilepsia. 59, 135–145.(2018).
Open Source Brain: a collaborative resource for visualizing, analyzing, simulating and developing standardized models of neurons and circuits. bioRxiv. 229484.(2018).
Optimization by Adaptive Stochastic Descent. PLOS ONE. 13, 1-16.(2018).
Using NEURON for reaction-diffusion modeling of extracellular dynamics. Frontiers in Neuroinformatics.(2018).
26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1. BMC Neuroscience. 18, 58.(2017).
Computer modeling for pharmacological treatments for dystonia. Drug Discov Today: Dis Model. In Press.(2017).
Computer modeling of epilepsy: opportunities for drug discovery. Drug Discov Today: Dis Model. In press.(2017).
Computer modeling of ischemic stroke. Drug Discov Today: Dis Model. 30, In press.(2017).
Computers, causality and cure in epilepsy. Brain. 140, 516-519.(2017).
Evolutionary algorithm optimization of biological learning parameters in a biomimetic neuroprosthesis. IBM Journal of Research and Development. 61, 6–1.(2017).
Load balancing for multi-threaded PDES of stochastic reaction-diffusion in neurons. J Simulation. 11, 267.(2017).
Measurement of peripheral vision reaction time identifies white matter disruption in patients with mild traumatic brain injury. J Neurotrauma.(2017).
Multiscale modeling in the clinic: diseases of the brain and nervous system. Brain Inform. 4, 219-230.(2017).
Multithreaded Stochastic PDES for Reactions and Diffusions in Neurons. ACM Transactions on Modeling and Computer Simulation (TOMACS). 27, 7.(2017).
Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. J Neurophysiol. 117, 148-162.(2017).
Parallel Stochastic discrete event simulation of calcium dynamics in neuron.. IEEE/ACM transactions on computational biology and bioinformatics.(2017).
Tracking recurrence of correlation structure in neuronal recordings. J Neurosci Methods. 275, 1-9.(2017).
25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.(2016).