Lab Publications

Found 151 results
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Journal Article
Lytton, WW., Williams ST., & Sober SJ. (1999).  Unmasking unmasked: Neural dynamics following stroke. Progress in Brain Research. 121, 203-218.
C Hunt, A., Erdemir A., Gabhann F. Mac, Lytton WW., Sander E. A., Transtrum M. K., et al. (2018).  The Spectrum of Mechanism-oriented Models for Explanations of Biological Phenomena.
Wathey, JC., Lytton WW., Jester JM., & Sejnowski TJ. (1991).  Simulations of synaptic potentials using realistic models of hippocampal pyramidal neurons. 163, 18.
Lytton, WW., & Sejnowski TJ. (1991).  Simulations of cortical pyramidal neurons synchronized by inhibitory interneurons. 66, 1059-1079.
Lytton, WW., Seidenstein AH., Dura-Bernal S., McDougal R. A., Schürmann F., & Hines ML. (2016).  Simulation neurotechnologies for advancing brain research: parallelizing large networks in NEURON. Neural Comput. 28, 2063-2090.
Lytton, WW., Seidenstein AH., Dura-Bernal S., McDougal R. A., Schürmann F., & Hines ML. (2016).  Simulation neurotechnologies for advancing brain research: parallelizing large networks in NEURON. Neural Comput. 28, 2063-2090.
Lytton, WW., & Stewart M. (2005).  A rule-based firing model for neural networks. Int. J. for Bioelectromagnetism. 7, 47-50.
Lytton, WW., & Stewart M. (2006).  Rule-based firing for network simulations. Neurocomputing. 69, 1160-1164.
Sober, SJ., Stark JM., Yamasaki DS., & Lytton WW. (1997).  Receptive field changes following stroke-like cortical ablation: a role for activation dynamics. jnphys. 78, 3438-3443.
Sober, SJ., Stark JM., Yamasaki DS., & Lytton WW. (1997).  Receptive field changes following stroke-like cortical ablation: a role for activation dynamics. jnphys. 78, 3438-3443.
McDougal, R. A., Skolnick Y., Schaff JC., Lytton WW., & Hines ML. (2012).  Reaction-diffusion modeling in the NEURON simulator. BMC Neuroscience. 13, P119.
McDougal, R. A., Skolnick Y., Schaff JC., Lytton WW., & Hines ML. (2012).  Reaction-diffusion modeling in the NEURON simulator. BMC Neuroscience. 13, P119.
Forgacs, PB., Gizycki H., Selesnick I., Syed NA., Ebrahim K., Avitable M., et al. (2008).  Perisaccadic parietal and occipital gamma power in light and in complete darkness. Perception. 37, 419-432.
Forgacs, PB., Gizycki H., Selesnick I., Syed NA., Ebrahim K., Avitable M., et al. (2008).  Perisaccadic parietal and occipital gamma power in light and in complete darkness. Perception. 37, 419-432.
Neymotin, S., Suter BA., Dura-Bernal S., Shepherd GM., Migliore M., & Lytton WW. (2017).  Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. J Neurophysiol. 117, 148-162.
Neymotin, S., Suter BA., Dura-Bernal S., Shepherd GM., Migliore M., & Lytton WW. (2017).  Optimizing computer models of corticospinal neurons to replicate in vitro dynamics. J Neurophysiol. 117, 148-162.
Kerr, C. C., Dura-Bernal S., Smolinski T. G., Chadderdon G. L., & Wilson D. P. (2018).  Optimization by Adaptive Stochastic Descent. PLOS ONE. 13, 1-16.
Neymotin, S., McDougal R. A., Sherif MA., Fall CP., Hines ML., & Lytton WW. (2015).  Neuronal calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model. Neural Comput. 27, 898–924.
Kerr, CC., O'Shea DJ., Goo W., Dura-Bernal S., Francis JT., Diester I., et al. (2014).  Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex. BMC Neuroscience. 15, P107.
Dura-Bernal, S., Suter B. A., Gleeson P., Cantarelli M., Quintana A., Rodriguez F., et al. (2019).  NetPyNE, a tool for data-driven multiscale modeling of brain circuits. eLife. 8, e44494.
Dura-Bernal, S., Suter B. A., Gleeson P., Cantarelli M., Quintana A., Rodriguez F., et al. (2019).  NetPyNE, a tool for data-driven multiscale modeling of brain circuits. eLife. 8, e44494.
Neymotin, S., Dura-Bernal S., Lakatos P., Sanger TD., & Lytton WW. (2016).  Multitarget multiscale simulation for pharmacological treatment of dystonia in motor cortex. Front Pharmacol. 7, 157.
Lytton, WW., Arle J., Bobashev G., Ji S., Klassen TL., Marmarelis VZ., et al. (2017).  Multiscale modeling in the clinic: diseases of the brain and nervous system. Brain Inform. 4, 219-230.
Lytton, WW., Arle J., Bobashev G., Ji S., Klassen TL., Marmarelis VZ., et al. (2017).  Multiscale modeling in the clinic: diseases of the brain and nervous system. Brain Inform. 4, 219-230.
Lytton, WW., Arle J., Bobashev G., Ji S., Klassen TL., Marmarelis VZ., et al. (2017).  Multiscale modeling in the clinic: diseases of the brain and nervous system. Brain Inform. 4, 219-230.
Chadderdon, GL., Mohan A., Suter BA., Neymotin S., Kerr CC., Francis JT., et al. (2014).  Motor cortex microcircuit simulation based on brain activity mapping. Neural Comput. 26, 1239–1262.
Chadderdon, GL., Mohan A., Suter BA., Neymotin S., Kerr CC., Francis JT., et al. (2014).  Motor cortex microcircuit simulation based on brain activity mapping. Neural Comput. 26, 1239–1262.
Womack, KB., Paliotta C., Strain JF., Ho JS., Skolnick Y., Lytton WW., et al. (2017).  Measurement of peripheral vision reaction time identifies white matter disruption in patients with mild traumatic brain injury. J Neurotrauma.
Womack, KB., Paliotta C., Strain JF., Ho JS., Skolnick Y., Lytton WW., et al. (2017).  Measurement of peripheral vision reaction time identifies white matter disruption in patients with mild traumatic brain injury. J Neurotrauma.
Dura-Bernal, S., Neymotin S., Suter BA., Shepherd GMG., & Lytton WW. (2018).  Long-range inputs and H-current regulate different modes of operation in a multiscale model of mouse M1 microcircuits. bioRxiv.
Dura-Bernal, S., Neymotin S., Suter BA., Shepherd GMG., & Lytton WW. (2018).  Long-range inputs and H-current regulate different modes of operation in a multiscale model of mouse M1 microcircuits. bioRxiv.
Orman, R., Von Gizycki G., Lytton WW., & Stewart M. (2008).  Local axon collaterals of area ca1 support spread of epileptiform discharges within CA1, but propagation is unidirectional. Hippocampus. 18, 1021-1033.
Neymotin, S., Lazarewicz MT., Sherif M., Contreras D., Finkel LH., & Lytton WW. (2011).  Ketamine disrupts theta modulation of gamma in a computer model of hippocampus. J Neurosci. 31, 11733-11743.
Kerr, C. C., O'Shea D. J., Goo W., Dura-Bernal S., Diester I., Kalanithi P., et al. (2014).  Information flow in optogenetically stimulated macaque motor cortex: simulation and experiment. Neural Control of Movement (NCM) meeting.
Sanjay, M., Neymotin S., & Babu KS. (2015).  Impaired dendritic inhibition leads to epileptic activity in a computer model of CA3. Hippocampus. in press.
Neymotin, S., Hilscher MM., Moulin TC., Skolnick Y., Lazarewicz MT., & Lytton WW. (2013).  Ih Tunes theta/gamma oscillations and cross-frequency coupling in an in silico CA3 model. PLoS One. 8, e76285.
Cantarelli, M., Marin B., Quintana A., Earnshaw M., Gleeson P., Dura-Bernal S., et al. (2018).  Geppetto: a reusable modular open platform for exploring neuroscience data and models. Phil. Trans. R. Soc. B. 373, 20170380.
Dura-Bernal, S., Neymotin S., Kerr CC., Sivagnanam S., Majumdar A., Francis JT., et al. (2017).  Evolutionary algorithm optimization of biological learning parameters in a biomimetic neuroprosthesis. IBM Journal of Research and Development. 61, 6–1.
Sanchez, J., Lytton WW., Carmena J., Principe J., Fortes J., Barbour R., et al. (2012).  Dynamically repairing and replacing neural networks: using hybrid computational and biological tools. {IEEE} Pulse. 3, 57-59.
Lytton, WW., Contreras D., Destexhe A., & Steriade M. (1997).  Dynamic interactions determine partial thalamic quiescence in a computer network model of spike-and-wave seizures. jnphys. 77, 1679-1696.
Lytton, WW., & Stewart M. (2002).  Dendritic resonance in in subicular dendrites, a computer model. 28,
Lytton, WW., & Stewart M. (2007).  Data mining through simulation. Methods Mol Biol. 401, 155-166.
Song, W., Kerr CC., Lytton WW., & Francis JT. (2013).  Cortical plasticity induced by spike-triggered microstimulation in primate somatosensory cortex. PLoS One. 8, e57453.
Lytton, WW., Destexhe A., & Sejnowski TJ. (1996).  Control of slow oscillations in the thalamocortical neuron: A computer model. Neuroscience. 70, 673-684.
Wathey, JC., Lytton WW., Jester JM., & Sejnowski TJ. (1992).  Computer simulations of EPSP-to-spike (E-S) potentiation in hippocampal CA1 pyramidal cells. 12, 607-618.
Lytton, WW., Orman R., & Stewart M. (2005).  Computer simulation of epilepsy: implications for seizure spread and behavioral dysfunction. Epilepsy & Behavior. 7, 336-344.
Lytton, WW., Hellman KM., & Sutula TP. (1996).  Computer network model of mossy fiber sprouting in dentate gyrus. Epilepsia – AES Proceedings. 37 S. 5, 117.
Lytton, WW., Stark JM., Yamasaki DS., & Sober SJ. (1999).  Computer models of stroke recovery: Implications for neurorehabilitation. The Neuroscientist. 5, 100-111.
Lytton, WW., Stark JM., Yamasaki DS., & Sober SJ. (1999).  Computer models of stroke recovery: Implications for neurorehabilitation. The Neuroscientist. 5, 100-111.
Lytton, WW., Hellman KM., & Sutula TP. (1998).  Computer Models of Hippocampal Circuit Changes of the Kindling Model of Epilepsy. Artificial Intelligence in Medicine. 13, 81-98.
Seidenstein, AH., Barone FC., & Lytton WW. (2015).  Computer modeling of ischemic stroke. Scholarpedia. 10, 32015; revision \#148671; Accessed Oct 12, 2015.
Lytton, WW., & Sejnowski TJ. (1992).  Computer model of ethosuximide's effect on a thalamic neuron. 32, 131-139.
Günay, C., Smolinski TG., Lytton WW., Morse TM., Gleeson P., Crook S., et al. (2008).  Computational Intelligence in Electrophysiology. Studies in Computational Intelligence. 122, 325-359.
Eguchi, A., Neymotin S., & Stringer SM. (2014).  Color opponent receptive fields self-organize in a biophysical model of visual cortex via spike-timing dependent plasticity. Front Neural Circuits. 8, 16.
Lytton, WW., Orman R., & Stewart M. (2008).  Broadening of activity with flow across neural structures. Perception. 37, 401-407.
Angulo, S. L., Henzi T., Neymotin S. A., Suarez M. D., Lytton W. W., Schwaller B., et al. (2019).  Amyloid pathology–produced unexpected modifications of calcium homeostasis in hippocampal subicular dendrites. Alzheimers. Dement..
Angulo, S. L., Henzi T., Neymotin S. A., Suarez M. D., Lytton W. W., Schwaller B., et al. (2019).  Amyloid pathology–produced unexpected modifications of calcium homeostasis in hippocampal subicular dendrites. Alzheimers. Dement..
Conference Proceedings
Holmes, W. R., Jung R., & Skinner F. (2007).  Computational Neuroscience (CNS*2007). BMC Neuroscience. 8, I1.
Denham, S., Poirazi P., De Schutter E., Friston K., Chan H. Ka, Nowotny T., et al. (2017).  26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1. BMC Neuroscience. 18, 58.
Denham, S., Poirazi P., De Schutter E., Friston K., Chan H. Ka, Nowotny T., et al. (2017).  26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1. BMC Neuroscience. 18, 58.
Denham, S., Poirazi P., De Schutter E., Friston K., Chan H. Ka, Nowotny T., et al. (2017).  26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1. BMC Neuroscience. 18, 58.
Denham, S., Poirazi P., De Schutter E., Friston K., Chan H. Ka, Nowotny T., et al. (2017).  26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1. BMC Neuroscience. 18, 58.
Denham, S., Poirazi P., De Schutter E., Friston K., Chan H. Ka, Nowotny T., et al. (2017).  26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1. BMC Neuroscience. 18, 58.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.
Sharpee, T. O., Destexhe A., Kawato M., Sekulić V., Skinner F. K., Wójcik D. K., et al. (2016).  25th Annual Computational Neuroscience Meeting: CNS-2016. BMC Neuroscience. 17, 54.